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||13|| Michael Banck || <banck> || Debian || Munich (D) || 28.01.2011 || 31.01.2010 || ||13|| Michael Banck       || <banck>          || Debian                   || Munich (D)      || 28.01.2011 || 31.01.2010 ||
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||15|| Sri Girish Srinivasa Murthy || || MPI Evol. Biol.|| Plön (D) || 28.01.2011 || 31.01.2011 ||
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||15|| Sri Girish Srinivasa Murthy || || MPI Evol. Biol.          || Plön (D)        || 28.01.2011 || 31.01.2011 ||
||16|| Jürgen Doenitz || || U Göttingen (Göbix) || Göttingen (D) || 28.01.2011 || 31.01.2011 ||

Debian Med Blend meeting in Lübeck

It seems somewhat amazing, but most of the Debian Med contributors have never met in person before. We think that to maximise the user experience, we shall get together, talk about more than our individual packages and identify some lower and some not-so-low-hanging fruits.

Location, Date

Participants

No

Name

Email

Organisation

Living in

Arrival at

Departure at

1

Steffen Möller

<moeller>

U Lübeck (Debian)

Lübeck (D)

28.01.2011

31.01.2010

2

Andreas Tille

<tille>

Debian

Wernigerode (D)

28.01.2011

31.01.2010

3

Tim Booth

tbooth_ceh.ac.uk

NERC (?BioLinux)

Oxford (UK)

28.01.2011

31.01.2010

4

Pjotr Prins

U Wageningen (Debian)

Wageningen (NL)

5

Alan Williams

U Manchester (Taverna)

Manchester (UK)

6

Hajo Krabbenhöft

U Lübeck (M.sc. student)

Lübeck (D)

28.01.2011

31.01.2010

7

Yask Gupta

U Lübeck (Ph.D. student)

Lübeck (D)

28.01.2011

31.01.2010

8

Kushal Sejwal

U Lübeck (Ph.D. student)

Würzburg (D)

28.01.2011

31.01.2010

9

Richard Holland

Eaglegenomics (Debian)

Southampton (UK)

10

Will Spooner

Eaglegenomics

Babraham (UK)

11

Peter Rice

EBI (EMBOSS)

Hinxton (UK)

12

Jim Procter

U Glasgow (Jalview)

Glasgow (UK)

13

Michael Banck

<banck>

Debian

Munich (D)

28.01.2011

31.01.2010

14

Andreas Hildebrandt

U Saarbrücken (BALLview)

Saarbrücken (D)

28.01.2011

31.01.2010

15

Sri Girish Srinivasa Murthy

MPI Evol. Biol.

Plön (D)

28.01.2011

31.01.2011

16

Jürgen Doenitz

U Göttingen (Göbix)

Göttingen (D)

28.01.2011

31.01.2011

17

18

19

20

  • Pending: Goettingen, Lübeck, Darmstadt

Agenda

  • improving our interaction with BioLinux

  • integration of public resources
    • brainstorm about how data.debian.org could help
    • review getData and link it with several packages

  • review of latest developments
    • Bio* roundup
    • Ensembl
    • Immunoinformatics
    • Cloud computing
    • Next generation sequencing
    • BioLib

      • strategies for packaging with minimal redundancy across packages
      • first upload to experimental
    • Taverna

      • formulating joint workflows
      • identify missing packagings
      • plan for packaging Taverna itself
  • organisational issues
    • ties to pkg-java

    • relation to other Blends

    • identify missing packages and setting priorities
  • strategies for further development
    • thinning the line between Debian and upstream
    • thinning the line between Debian and educators
    • outreach
      • first joint paper recently accepted in BMC Bioinformatics
      • discuss paper on getData
      • papers citing or mentioning us
      • books and book chapters

Teams / subgroups

TBA

Acknowledgements

the sprint has been possible thanks to:

  • travel support by U Manchester, NERC, U Glasgow, Eaglegenomics, European Bioinformatics Institute
  • we still hope for some external contributions


CategorySprint