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|| Hajo Krabbenhöft || || local student || Lübeck (D) || 28.01.2011 || 31.01.2010 || || Hajo Krabbenhöft || || M.sc. student || Lübeck (D) || 28.01.2011 || 31.01.2010 ||
|| Yask Gupta || || Ph.D. student || Lübeck (D) || 28.01.2011 || 31.01.2010 ||

Debian Med Blend meeting in Lübeck

It seems somewhat amazing, but most of the Debian Med contributors have never met in person before. We think that to maximise the user experience, we shall get together, talk about more than our individual packages and identify some lower and some not-so-low-hanging fruits.

Location, Date

Participants

Name

Email

Organisation

Living in

Arrival at

Departure at

Steffen Möller

moeller_debian.org

Debian

Lübeck (D)

28.01.2011

31.01.2010

Andreas Tille

tille_debian.org

Debian

Wernigerode (D)

28.01.2011

31.01.2010

Tim Booth

tbooth_ceh.ac.uk

BioLinux

Oxford (UK)

28.01.2011

31.01.2010

Pjotr Prins

Debian

Wageningen/Groningen (NL)

Alan Williams

Taverna

Manchester (UK)

Hajo Krabbenhöft

M.sc. student

Lübeck (D)

28.01.2011

31.01.2010

Yask Gupta

Ph.D. student

Lübeck (D)

28.01.2011

31.01.2010

  • Pending: Goettingen, Cambridge, Glasgow, Helsinki

Agenda

  • improving our interaction with BioLinux

  • integration of public resources
    • brainstorm about how data.debian.org could help
    • review getData and link it with several packages

  • review of latest developments
    • Bio* roundup
    • Ensembl
    • Cloud computing
    • Next generation sequencing
    • BioLib

      • strategies for packaging with minimal redundancy across packages
      • first upload to experimental
    • Taverna (if Manchester comes)

      • formulating joint workflows
      • identify missing packagings
      • plan for packaging Taverna itself
  • strategies for further development
    • thinning the line between Debian and upstream
    • ties to pkg-java

    • relation to other Blends

    • identify missing packages and setting priorities
    • outreach
      • first joint paper recently accepted in BMC Bioinformatics
      • papers citing or mentioning us
      • books and book chapters

Reports

Acknowledgements

the sprint has been possible thanks to:

  • your organisation could be listed here


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