Differences between revisions 24 and 40 (spanning 16 versions)
Revision 24 as of 2007-02-10 21:06:27
Size: 1346
Comment:
Revision 40 as of 2009-03-16 03:36:53
Size: 54
Editor: anonymous
Comment: converted to 1.6 markup
Deletions are marked like this. Additions are marked like this.
Line 1: Line 1:
== Debian BioConductor archive ==
The [http://alioth.debian.org/projects/pkg-bioc/ Alioth pkg-bioc] is preparing a repository for Debian packages for the BioConductor collection of R libraries.

= Bits not removed from the Wiki (yet) =
 * Software{{{
   wget -r --reject css,txt,zip,pdf,html,htm -l 2 -N -nH \
   http://www.bioconductor.org/packages/2.0/bioc/
}}}
 * Experiment Data
 * Annotation{{{
   rooturl="http://www.bioconductor.org/packages/2.0/data/annotation/html/"

   for p in \
     ${rooturl}["humanCHRLOC"].html \
     ${rooturl}["humanLLMappings"].html \
     ${rooturl}["ratCHRLOC"].html \
     ${rooturl}["ratLLMappings"].html \
     ${rooturl}["mouseCHRLOC"].html \
     ${rooturl}["mouseLLMappings"].html \
     ${rooturl}KEGG.html \
     ${rooturl}KEGGdb.html \
     ${rooturl}["ratCHRLOC"].html \
     ${rooturl}["ratLLMappings"].html \
     ${rooturl}GO.html \
     ${rooturl}GOdb.html \
     ${rooturl}PFAM.html \
 ; \
 do
         wget -r --reject css,txt,pdf,html,htm,zip -l 1 -N -nH $p
 done
}}}
Any suggestion on how to improve the download of a selected number of packages from the annotation packages are welcome.
 * For later runs only:{{{
    (cd packages/bioc/devel/src/contrib/Source/ && deldoubles.pl)
}}}
The tool indicates packages that are outdated and should be removed.
= THIS PAGE IS OBSOLETE =
Go back to AliothPkgBioc.

THIS PAGE IS OBSOLETE

Go back to ?AliothPkgBioc.